A B C D E F G H I L M O P R S T U V 

A

actionPerformed(ActionEvent) - Method in class gate.creole.ontology.ocat.AnnotationEditor
 
actionPerformed(ActionEvent) - Method in class gate.creole.ontology.ocat.AnnotationEditor.AddChangeAnnotationAction
 
actionPerformed(ActionEvent) - Method in class gate.creole.ontology.ocat.AnnotationEditor.CancelAction
 
actionPerformed(ActionEvent) - Method in class gate.creole.ontology.ocat.AnnotationEditor.DeleteAnnotationAction
 
actionPerformed(ActionEvent) - Method in class gate.creole.ontology.ocat.AnnotationEditor.EndOffsetExtendLeftAction
 
actionPerformed(ActionEvent) - Method in class gate.creole.ontology.ocat.AnnotationEditor.EndOffsetExtendRightAction
 
actionPerformed(ActionEvent) - Method in class gate.creole.ontology.ocat.AnnotationEditor.HideHighlightsAction
 
actionPerformed(ActionEvent) - Method in class gate.creole.ontology.ocat.AnnotationEditor.StartOffsetExtendLeftAction
 
actionPerformed(ActionEvent) - Method in class gate.creole.ontology.ocat.AnnotationEditor.StartOffsetExtendRightAction
 
addNewAnnotation(ClassNode, boolean, FeatureMap, boolean, boolean) - Method in class gate.creole.ontology.ocat.OntologyTreeListener
Method to add a new annotation
addSubNode(ClassNode) - Method in class com.ontotext.gate.vr.ClassNode
Adds a sub node
addToClassesToHide(HashSet<String>) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
addToClassesToShow(HashSet<String>) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
addTreeModelListener(TreeModelListener) - Method in class com.ontotext.gate.vr.OntoTreeModel
 
AnnotationAction - Class in gate.creole.ontology.ocat
This class provides the GUI implementation for creating/changing/deleting annotations from the text.
AnnotationAction(OntologyTreePanel) - Constructor for class gate.creole.ontology.ocat.AnnotationAction
Constructor
annotationAction - Variable in class gate.creole.ontology.ocat.OntologyViewer
This object provides a functionality to add/remove/change the annotations
annotationAdded(AnnotationSetEvent) - Method in class gate.creole.ontology.ocat.OntologyViewer
This method is invoked whenever a new annotation is added
AnnotationEditor - Class in gate.creole.ontology.ocat
 
AnnotationEditor(OntologyTreePanel) - Constructor for class gate.creole.ontology.ocat.AnnotationEditor
Constructor
AnnotationEditor.AddChangeAnnotationAction - Class in gate.creole.ontology.ocat
 
AnnotationEditor.AddChangeAnnotationAction() - Constructor for class gate.creole.ontology.ocat.AnnotationEditor.AddChangeAnnotationAction
 
AnnotationEditor.CancelAction - Class in gate.creole.ontology.ocat
 
AnnotationEditor.CancelAction(Icon) - Constructor for class gate.creole.ontology.ocat.AnnotationEditor.CancelAction
 
AnnotationEditor.CustomScroller - Class in gate.creole.ontology.ocat
 
AnnotationEditor.CustomScroller(Component) - Constructor for class gate.creole.ontology.ocat.AnnotationEditor.CustomScroller
 
AnnotationEditor.DeleteAnnotationAction - Class in gate.creole.ontology.ocat
 
AnnotationEditor.DeleteAnnotationAction(Icon) - Constructor for class gate.creole.ontology.ocat.AnnotationEditor.DeleteAnnotationAction
 
AnnotationEditor.EndOffsetExtendLeftAction - Class in gate.creole.ontology.ocat
 
AnnotationEditor.EndOffsetExtendLeftAction(Icon) - Constructor for class gate.creole.ontology.ocat.AnnotationEditor.EndOffsetExtendLeftAction
 
AnnotationEditor.EndOffsetExtendRightAction - Class in gate.creole.ontology.ocat
 
AnnotationEditor.EndOffsetExtendRightAction(Icon) - Constructor for class gate.creole.ontology.ocat.AnnotationEditor.EndOffsetExtendRightAction
 
AnnotationEditor.HideHighlightsAction - Class in gate.creole.ontology.ocat
 
AnnotationEditor.HideHighlightsAction(String) - Constructor for class gate.creole.ontology.ocat.AnnotationEditor.HideHighlightsAction
 
AnnotationEditor.StartOffsetExtendLeftAction - Class in gate.creole.ontology.ocat
 
AnnotationEditor.StartOffsetExtendLeftAction(Icon) - Constructor for class gate.creole.ontology.ocat.AnnotationEditor.StartOffsetExtendLeftAction
 
AnnotationEditor.StartOffsetExtendRightAction - Class in gate.creole.ontology.ocat
 
AnnotationEditor.StartOffsetExtendRightAction(Icon) - Constructor for class gate.creole.ontology.ocat.AnnotationEditor.StartOffsetExtendRightAction
 
annotationRange - Variable in class gate.creole.ontology.ocat.OntologyTreeListener
This is where we specify the start/end offsets of the highlighted annotations which is then used for quick lookup to see if the mouse is on one of them
annotationRemoved(AnnotationSetEvent) - Method in class gate.creole.ontology.ocat.OntologyViewer
This method is called by respective selectedAnnotationSetName from where an annotation is removed
annotationSetAdded(DocumentEvent) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
annotationSetRemoved(DocumentEvent) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
This methods implements the actions when any selectedAnnotationSetName is removed from
annotationUpdated(AnnotationEvent) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
annotationWindow - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
applyToAll - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
asID2ASName - Variable in class gate.creole.ontology.ocat.OntologyViewer
Each Annotation Set is given a unique ID, which is used later in the annotationsID2ASID map.

B

baseSplit - Variable in class com.ontotext.gate.vr.Gaze
 
btnLinearLoad - Variable in class com.ontotext.gate.vr.Gaze
 
btnLinearNew - Variable in class com.ontotext.gate.vr.Gaze
 
btnLinearSave - Variable in class com.ontotext.gate.vr.Gaze
 
btnLinearSaveAs - Variable in class com.ontotext.gate.vr.Gaze
 
btnListLoad - Variable in class com.ontotext.gate.vr.Gaze
 
btnListNew - Variable in class com.ontotext.gate.vr.Gaze
 
btnListSave - Variable in class com.ontotext.gate.vr.Gaze
 
btnListSaveAll - Variable in class com.ontotext.gate.vr.Gaze
 
btnListSaveAs - Variable in class com.ontotext.gate.vr.Gaze
 
btnMappingLoad - Variable in class com.ontotext.gate.vr.Gaze
 
btnMappingNew - Variable in class com.ontotext.gate.vr.Gaze
 
btnMappingSave - Variable in class com.ontotext.gate.vr.Gaze
 
btnMappingSaveAs - Variable in class com.ontotext.gate.vr.Gaze
 
btnOntologyLoad - Variable in class com.ontotext.gate.vr.Gaze
 

C

CheckRenderer - Class in gate.creole.ontology.ocat
Description: This class provides the renderer for the Ontology Tree Nodes.
CheckRenderer(OntologyTreePanel) - Constructor for class gate.creole.ontology.ocat.CheckRenderer
Constructor
children() - Method in class com.ontotext.gate.vr.ClassNode
 
children() - Method in interface com.ontotext.gate.vr.IFolder
 
CLASS_NODE_FLAVOR - Static variable in class com.ontotext.gate.vr.ClassNode
flavor used for drag and drop
classesToHide - Variable in class gate.creole.ontology.ocat.OntologyViewerOptions
List of ontology classes to be filtered out.
classesToShow - Variable in class gate.creole.ontology.ocat.OntologyViewerOptions
List of ontology classes to be filtered out.
ClassNode - Class in com.ontotext.gate.vr
Represents a single class node from the visualized ontology
ClassNode(Ontology) - Constructor for class com.ontotext.gate.vr.ClassNode
Constructs a root class node from an ontology
ClassNode(OClass) - Constructor for class com.ontotext.gate.vr.ClassNode
Constructs a class node given an ontology class
ClassNode(OInstance) - Constructor for class com.ontotext.gate.vr.ClassNode
Constructs a class node given an ontology instance
ClassNode(MappingNode) - Constructor for class com.ontotext.gate.vr.ClassNode
Constructs a class node given a mapping node
cleanup() - Method in class gate.creole.ontology.ocat.OntologyViewer
Releases all resources and listeners
cleanup() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Releases all resources
com.ontotext.gate.vr - package com.ontotext.gate.vr
 
ComboRenderer - Class in gate.creole.ontology.ocat
Description: This class provides the renderer for the Ontology Tree Nodes.
ComboRenderer(OntologyTreePanel) - Constructor for class gate.creole.ontology.ocat.ComboRenderer
Constructor
contentEdited(DocumentEvent) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
createInstance - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
createRootNode(Ontology) - Static method in class com.ontotext.gate.vr.ClassNode
create a structure representing the class hierarchy of an ontology
createRootNode(Ontology, boolean, boolean) - Static method in class com.ontotext.gate.vr.ClassNode
 
createRootNode(Ontology, MappingDefinition, Map<String, ClassNode>) - Static method in class com.ontotext.gate.vr.ClassNode
Creates a structure representing the class hierarchy of an ontology and the gazetteerLists mapped to it.
currentOntologyTree - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
Instance of JTree used to store information about ontology classes
currentOResource2ColorMap - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
Current ontologyColorScheme
currentOResource2IsSelectedMap - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
Class Selection map for the current ontology
currentOResourceName2AnnotationsListMap - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
Current Annotation Map that stores the annotation in arraylist for each concept
currentProperties - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
Class Selection map for the current ontology
currentPropValuesAndInstances2ClassesMap - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
instances of the ontology and their classes

D

datastoreClosed(CreoleEvent) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
datastoreCreated(CreoleEvent) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
datastoreOpened(CreoleEvent) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
DEFAULT_ANNOTATION_SET - Static variable in class gate.creole.ontology.ocat.OntologyViewerOptions
Instead of a null value, we specify the defaultAnnotationSetName with some strange string
DEFAULT_ANNOTATION_TYPE - Static variable in class gate.creole.ontology.ocat.OntologyViewerOptions
Instead of a null value, we specify the defaultAnnotationSetName with some strange string
DEFAULT_CLASS_URI_FEATURE_NAME - Static variable in class gate.creole.ontology.ocat.OntologyViewerOptions
Instead of a null value, we specify the defaultAnnotationSetName with some strange string
DEFAULT_INSTANCE_URI_FEATURE_NAME - Static variable in class gate.creole.ontology.ocat.OntologyViewerOptions
Instead of a null value, we specify the defaultAnnotationSetName with some strange string
deHighlight - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
deleteAnnotation(Annotation) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
Deletes the Annotations from the document
deleteAnnotationAction - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
deleteBtn - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
disableAnnotationSetSelection(String) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
The method disables the graphical selection of selectedAnnotationSetName and will allow user to provide the annotationSetName explicitly
disableFiltering(boolean) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Disable Filtering.
dissmissAction - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
dissmissBtn - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
documentTextArea - Variable in class gate.creole.ontology.ocat.OntologyViewer
This is where the actual document text is being displayed.
documentTextualDocumentView - Variable in class gate.creole.ontology.ocat.OntologyViewer
TextualDocument View instance

E

editingRow - Variable in class gate.creole.ontology.ocat.FeaturesEditor
 
enabledAnnotationSetSelection() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
This will reenable the graphical support for selecting annotationSetsNamesCB
eoelAction - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
eoelBtn - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
eoerAction - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
eoerBtn - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
equals(Object) - Method in class com.ontotext.gate.vr.ClassNode
 

F

featuresEditor - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
FeaturesEditor - Class in gate.creole.ontology.ocat
 
FeaturesEditor() - Constructor for class gate.creole.ontology.ocat.FeaturesEditor
 
FeaturesEditor.Feature - Class in gate.creole.ontology.ocat
 
FeaturesEditor.Feature(String, Object) - Constructor for class gate.creole.ontology.ocat.FeaturesEditor.Feature
 
FeaturesEditor.FeatureEditorRenderer - Class in gate.creole.ontology.ocat
 
FeaturesEditor.FeatureEditorRenderer() - Constructor for class gate.creole.ontology.ocat.FeaturesEditor.FeatureEditorRenderer
 
FeaturesEditor.FeaturesTableModel - Class in gate.creole.ontology.ocat
 
FeaturesEditor.FeaturesTableModel() - Constructor for class gate.creole.ontology.ocat.FeaturesEditor.FeaturesTableModel
 
fileMenu - Variable in class com.ontotext.gate.vr.Gaze
 
fireTreeStructureChanged(IFolder) - Method in class com.ontotext.gate.vr.OntoTreeModel
 

G

gate.creole.ontology.ocat - package gate.creole.ontology.ocat
 
Gaze - Class in com.ontotext.gate.vr
Gaze is a Gazetteer VR capable of viewing and editing gazetteer lists, linear definitions (lists.def files), and mapping definitions (mappings between ontology classes and gazetteer lists).
Gaze() - Constructor for class com.ontotext.gate.vr.Gaze
 
GeneralEditorException - Exception in com.ontotext.gate.vr
A general editor exception
GeneralEditorException(String) - Constructor for exception com.ontotext.gate.vr.GeneralEditorException
 
getAllClassNames() - Method in class gate.creole.ontology.ocat.OntologyTreePanel
 
getAllInstanceNames() - Method in class gate.creole.ontology.ocat.OntologyTreePanel
 
getAnnotationSet(Annotation) - Method in class gate.creole.ontology.ocat.OntologyViewer
Given an annotation, this method tells which selectedAnnotationSetName it belongs to.
getChild(int) - Method in class com.ontotext.gate.vr.ClassNode
 
getChild(int) - Method in interface com.ontotext.gate.vr.IFolder
 
getChild(Object, int) - Method in class com.ontotext.gate.vr.OntoTreeModel
 
getChildCount() - Method in class com.ontotext.gate.vr.ClassNode
 
getChildCount() - Method in interface com.ontotext.gate.vr.IFolder
 
getChildCount(Object) - Method in class com.ontotext.gate.vr.OntoTreeModel
 
getChildren() - Method in class com.ontotext.gate.vr.ClassNode
 
getChildren() - Method in interface com.ontotext.gate.vr.IFolder
 
getClassesToHide() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Gets a set of ontology classes disabled in the OCAT.
getClassesToHideFileURL() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Gets the URL of the filter file being used.
getClassesToShow() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Gets a set of ontology classes disabled in the OCAT.
getClassesToShowFileURL() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Gets the URL of the filter file being used.
getClassFeatureValue(Annotation, OntologyViewerOptions) - Static method in class gate.creole.ontology.ocat.Utils
Given an Annotation this method gets the value of gate.creole.ANNIEConstants.LOOKUP_CLASS_FEATURE_NAME feature.
getColumnCount() - Method in class gate.creole.ontology.ocat.FeaturesEditor.FeaturesTableModel
 
getColumnName(int) - Method in class gate.creole.ontology.ocat.FeaturesEditor.FeaturesTableModel
 
getCurrentOntology() - Method in class gate.creole.ontology.ocat.OntologyTreePanel
Returns the current ontology
getDeleteConfirmation() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Returns if Child Feature is set to ON/OFF
getFirstNode(String) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
This method finds out the ClassNode node in the ontology Tree for given class
getGUI() - Method in class gate.creole.ontology.ocat.OntologyTreePanel
returns the currentOntologyTree Panel
getGUI() - Method in class gate.creole.ontology.ocat.OntologyViewer
gets the main tabbed pane that will be displayed as the OCAT component
getGUI() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Returns the panel for ontoOption Panel
getHighlightColor(String) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
Returns the associated color for the given class
getHighlighter() - Method in class gate.creole.ontology.ocat.OntologyTreePanel
Returns the instance of highlighter
getIndexOfChild(Object) - Method in class com.ontotext.gate.vr.ClassNode
 
getIndexOfChild(Object) - Method in interface com.ontotext.gate.vr.IFolder
 
getIndexOfChild(Object, Object) - Method in class com.ontotext.gate.vr.OntoTreeModel
 
getInstanceFeatureValue(Annotation, OntologyViewerOptions) - Static method in class gate.creole.ontology.ocat.Utils
Given an Annotation this method gets the value of gate.creole.ANNIEConstants.LOOKUP_INSTANCE_FEATURE_NAME feature.
getListCellRendererComponent(JList, Object, int, boolean, boolean) - Method in class gate.creole.ontology.ocat.ComboRenderer
Renderer method
getNode(String) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
This method finds out the ClassNode node in the ontology Tree for given class
getOntologyViewerOptions() - Method in class gate.creole.ontology.ocat.OntologyViewer
A method that returns the instance of ontology viewer options.
getPreferredSize() - Method in class gate.creole.ontology.ocat.AnnotationEditor.CustomScroller
 
getPropertyName() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
getRoot() - Method in class com.ontotext.gate.vr.OntoTreeModel
 
getRowCount() - Method in class gate.creole.ontology.ocat.FeaturesEditor.FeaturesTableModel
 
getSelectedAnnotationSetName() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Returns the currently selected Annotation Set
getSelectedAnnotationType() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Returns the currently selected Annotation Type
getSelectedClassURIFeatureName() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
getSelectedInstanceURIFeatureName() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
getSource() - Method in class com.ontotext.gate.vr.ClassNode
Gets the Source object
getTable() - Method in class gate.creole.ontology.ocat.FeaturesEditor
 
getTableCellEditorComponent(JTable, Object, boolean, int, int) - Method in class gate.creole.ontology.ocat.FeaturesEditor.FeatureEditorRenderer
 
getTableCellRendererComponent(JTable, Object, boolean, boolean, int, int) - Method in class gate.creole.ontology.ocat.FeaturesEditor.FeatureEditorRenderer
 
getTransferData(DataFlavor) - Method in class com.ontotext.gate.vr.ClassNode
 
getTransferDataFlavors() - Method in class com.ontotext.gate.vr.ClassNode
 
getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class gate.creole.ontology.ocat.CheckRenderer
Renderer method
getTreePath(IFolder) - Method in class gate.creole.ontology.ocat.OntologyTreeListener
This method is to find out the path for this node from the root of the tree
getType() - Method in class gate.creole.ontology.ocat.OntologyViewer
 
getValueAt(int, int) - Method in class gate.creole.ontology.ocat.FeaturesEditor.FeaturesTableModel
 
gridBagLayout1 - Variable in class com.ontotext.gate.vr.Gaze
 
gridBagLayout2 - Variable in class com.ontotext.gate.vr.Gaze
 
gridBagLayout3 - Variable in class com.ontotext.gate.vr.Gaze
 
gridBagLayout4 - Variable in class com.ontotext.gate.vr.Gaze
 

H

hashCode() - Method in class com.ontotext.gate.vr.ClassNode
 
hideAllWindows() - Method in class gate.creole.ontology.ocat.AnnotationAction
This method to hide all the popup windows
hideWindow() - Method in class gate.creole.ontology.ocat.AnnotationEditor
 
highlightedAnnotations - Variable in class gate.creole.ontology.ocat.OntologyTreeListener
List of highlighted annotations
highlighter - Variable in class gate.creole.ontology.ocat.OntologyTreeListener
Highlighter that is used for highlighting

I

IFolder - Interface in com.ontotext.gate.vr
 
init() - Method in class com.ontotext.gate.vr.Gaze
 
init() - Method in class gate.creole.ontology.ocat.FeaturesEditor
Initialise this resource, and return it.
initGUI() - Method in class gate.creole.ontology.ocat.FeaturesEditor
 
initGUI() - Method in class gate.creole.ontology.ocat.OntologyViewer
Initialises the GUI
initLocalData() - Method in class gate.creole.ontology.ocat.OntologyViewer
ReIntializes all Maps used for local uses
isAddAllOptionCaseSensitive() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Returns if case sensitive option is set to ON/OFF
isCellEditable(int, int) - Method in class gate.creole.ontology.ocat.FeaturesEditor.FeaturesTableModel
 
isChildFeatureDisabled() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Returns if Child Feature is set to ON/OFF
isClassesToHideFilterOn() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
isClassesToShowFilterOn() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
isDataFlavorSupported(DataFlavor) - Method in class com.ontotext.gate.vr.ClassNode
 
isLeaf(Object) - Method in class com.ontotext.gate.vr.OntoTreeModel
 

L

linearBar - Variable in class com.ontotext.gate.vr.Gaze
 
linearLabel - Variable in class com.ontotext.gate.vr.Gaze
 
linearList - Variable in class com.ontotext.gate.vr.Gaze
 
linearPanel - Variable in class com.ontotext.gate.vr.Gaze
 
linearPopup - Variable in class com.ontotext.gate.vr.Gaze
Linear Definition Popup menu
linearPopupEdit - Variable in class com.ontotext.gate.vr.Gaze
Linear Definition Edit Popup Item
linearPopupInsert - Variable in class com.ontotext.gate.vr.Gaze
Linear Definition Insert Popup Item
linearPopupRemove - Variable in class com.ontotext.gate.vr.Gaze
Linear Definition Remove Popup Item
linearScroll - Variable in class com.ontotext.gate.vr.Gaze
 
linearSplit - Variable in class com.ontotext.gate.vr.Gaze
 
listArea - Variable in class com.ontotext.gate.vr.Gaze
 
listBar - Variable in class com.ontotext.gate.vr.Gaze
 
listLabel - Variable in class com.ontotext.gate.vr.Gaze
 
listPanel - Variable in class com.ontotext.gate.vr.Gaze
 
listScroll - Variable in class com.ontotext.gate.vr.Gaze
 

M

mainMenu - Variable in class com.ontotext.gate.vr.Gaze
 
mappingBar - Variable in class com.ontotext.gate.vr.Gaze
 
mappingLabel - Variable in class com.ontotext.gate.vr.Gaze
 
mappingList - Variable in class com.ontotext.gate.vr.Gaze
 
mappingPanel - Variable in class com.ontotext.gate.vr.Gaze
 
mappingScroll - Variable in class com.ontotext.gate.vr.Gaze
 
mappingSplit - Variable in class com.ontotext.gate.vr.Gaze
 
MappingTreeView - Class in com.ontotext.gate.vr
Mapping Tree View extends JTree in order to represent the mapping information.
MappingTreeView(OntoTreeModel, MappingDefinition, Gaze) - Constructor for class com.ontotext.gate.vr.MappingTreeView
 
menuAbout - Variable in class com.ontotext.gate.vr.Gaze
 
menuHelp - Variable in class com.ontotext.gate.vr.Gaze
 
menuLinear - Variable in class com.ontotext.gate.vr.Gaze
 
menuLinearLoad - Variable in class com.ontotext.gate.vr.Gaze
 
menuLinearNew - Variable in class com.ontotext.gate.vr.Gaze
 
menuLinearSave - Variable in class com.ontotext.gate.vr.Gaze
 
menuLinearSaveAs - Variable in class com.ontotext.gate.vr.Gaze
 
menuList - Variable in class com.ontotext.gate.vr.Gaze
 
menuListLoad - Variable in class com.ontotext.gate.vr.Gaze
 
menuListNew - Variable in class com.ontotext.gate.vr.Gaze
 
menuListSave - Variable in class com.ontotext.gate.vr.Gaze
 
menuListSaveAll - Variable in class com.ontotext.gate.vr.Gaze
 
menuListSaveAs - Variable in class com.ontotext.gate.vr.Gaze
 
menuMapping - Variable in class com.ontotext.gate.vr.Gaze
 
menuMappingLoad - Variable in class com.ontotext.gate.vr.Gaze
 
menuMappingNew - Variable in class com.ontotext.gate.vr.Gaze
 
menuMappingSave - Variable in class com.ontotext.gate.vr.Gaze
 
menuMappingSaveAs - Variable in class com.ontotext.gate.vr.Gaze
 
menuOntology - Variable in class com.ontotext.gate.vr.Gaze
 
menuOntologyLoad - Variable in class com.ontotext.gate.vr.Gaze
 
menuRefresh - Variable in class com.ontotext.gate.vr.Gaze
 
mouseClicked(MouseEvent) - Method in class gate.creole.ontology.ocat.OntologyTreeListener
This method is invoked whenever user clicks on one of the classes in the ontology tree
mouseDragged(MouseEvent) - Method in class gate.creole.ontology.ocat.AnnotationAction
Invoked when mouse is dragged
mouseMoved(MouseEvent) - Method in class gate.creole.ontology.ocat.AnnotationAction
Invoked when Mouse hovers over the document
mousePressed(MouseEvent) - Method in class gate.creole.ontology.ocat.AnnotationAction
Grabs the current location of mouse pointers

O

ontology2ColorSchemesMap - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
Stores various color schemes for different ontology classes
ontology2OntoTreeModels - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
Stores all the various ontology2OntoTreeModels for different ontologies
ontology2OResourceSelectionMap - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
This stores Class selection map for each individual loaded ontology
ontology2PropertiesMap - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
This stores Class selection map for each individual loaded ontology
ontology2PropValuesAndInstances2ClassesMap - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
This stores instances and the classes that instance belongs to
ontologyBar - Variable in class com.ontotext.gate.vr.Gaze
 
ontologyLabel - Variable in class com.ontotext.gate.vr.Gaze
 
ontologyModified(Ontology, OResource, int) - Method in class com.ontotext.gate.vr.Gaze
 
ontologyModified(Ontology, OResource, int) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
ontologyPanel - Variable in class com.ontotext.gate.vr.Gaze
 
ontologyReset(Ontology) - Method in class com.ontotext.gate.vr.Gaze
 
ontologyReset(Ontology) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
ontologyScroll - Variable in class com.ontotext.gate.vr.Gaze
 
OntologyTreeListener - Class in gate.creole.ontology.ocat
Description: This class listens events on tree selection
OntologyTreeListener(OntologyTreePanel) - Constructor for class gate.creole.ontology.ocat.OntologyTreeListener
Constructor
ontologyTreePanel - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
OntologyTreePanel - Class in gate.creole.ontology.ocat
This class provides a GUI frame for the OCAT tool, where one of the components is the OntologyTree, the other one is Ontology Options and so on.
OntologyTreePanel(OntologyViewer) - Constructor for class gate.creole.ontology.ocat.OntologyTreePanel
Constructor
OntologyViewer - Class in gate.creole.ontology.ocat
In this class we implement the basic structure of the ontology viewer Which includes the total ontologies that has been loaded in the system option for the new ontology, if someone wishes to load it into the system the ontology viewer (which displays all the conetps) Ontology instance viewer and the instance attribute viewer
OntologyViewer() - Constructor for class gate.creole.ontology.ocat.OntologyViewer
 
ontologyViewerOptions - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
OntologyViewerOptions instance
OntologyViewerOptions - Class in gate.creole.ontology.ocat
Description: This class Provides options window to set the options for Ontology Viewer
OntologyViewerOptions(OntologyTreePanel) - Constructor for class gate.creole.ontology.ocat.OntologyViewerOptions
Constructor
ontoTreeListener - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
OntologyTreeListener that listens to the selection of ontology classes
OntoTreeModel - Class in com.ontotext.gate.vr
A Tree Model used for the tree view of an ontology.
OntoTreeModel(IFolder) - Constructor for class com.ontotext.gate.vr.OntoTreeModel
 
ontoViewer - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
Instance of ontology Viewer
oTree - Variable in class com.ontotext.gate.vr.Gaze
 

P

populate() - Method in class gate.creole.ontology.ocat.FeaturesEditor
Called internally whenever the data represented changes.
POSITION_X - Static variable in class com.ontotext.gate.vr.Gaze
positin x when running from the tools menu
POSITION_Y - Static variable in class com.ontotext.gate.vr.Gaze
positin y when running from the tools menu
prepareCombo(JComboBox, int, int) - Method in class gate.creole.ontology.ocat.FeaturesEditor.FeatureEditorRenderer
 
processGateEvent(GateEvent) - Method in class com.ontotext.gate.vr.Gaze
 
processGazetteerEvent(GazetteerEvent) - Method in class com.ontotext.gate.vr.Gaze
 

R

refreshHighlights() - Method in class gate.creole.ontology.ocat.OntologyTreeListener
Method to highlight the annotations
registerHooks() - Method in class gate.creole.ontology.ocat.OntologyViewer
 
removeFromClassesToHide(HashSet<String>) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
removeFromClassesToShow(HashSet<String>) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
removeHighlights() - Method in class gate.creole.ontology.ocat.OntologyTreeListener
Method to remove all highlights
removeOntologyTreeModel(Ontology, boolean) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
This method is called to remove the stored ontology model and free up the memory with other resources occupied by the removed ontology
removeSubNode(ClassNode) - Method in class com.ontotext.gate.vr.ClassNode
Removes a sub class
removeTreeModelListener(TreeModelListener) - Method in class com.ontotext.gate.vr.OntoTreeModel
 
rename(String) - Method in class com.ontotext.gate.vr.ClassNode
Renames this class node
resourceAdded(Ontology, OResource) - Method in class com.ontotext.gate.vr.Gaze
 
resourceAdded(Ontology, OResource) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
resourceLoaded(CreoleEvent) - Method in class gate.creole.ontology.ocat.OntologyViewer
Gets executed whenever new resource is loaded in the GATE system
resourcePropertyValueChanged(Ontology, OResource, RDFProperty, Object, int) - Method in class com.ontotext.gate.vr.Gaze
 
resourcePropertyValueChanged(Ontology, OResource, RDFProperty, Object, int) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
resourceRelationChanged(Ontology, OResource, OResource, int) - Method in class com.ontotext.gate.vr.Gaze
 
resourceRelationChanged(Ontology, OResource, OResource, int) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
resourceRenamed(Resource, String, String) - Method in class gate.creole.ontology.ocat.OntologyViewer
Gets executed whenever resource name is changed
resourcesRemoved(Ontology, String[]) - Method in class com.ontotext.gate.vr.Gaze
 
resourcesRemoved(Ontology, String[]) - Method in class gate.creole.ontology.ocat.OntologyViewer
 
resourceUnloaded(CreoleEvent) - Method in class gate.creole.ontology.ocat.OntologyViewer
Gets executed whenever existing resource is unloaded in the GATE system

S

scroller - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
scrollerPanel - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
selectedAnnotationSetName - Variable in class gate.creole.ontology.ocat.OntologyViewerOptions
Currently selected annotationSetName
selectedAnnotationType - Variable in class gate.creole.ontology.ocat.OntologyViewerOptions
Currently selected annotation type
setChildren(Vector<ClassNode>) - Method in class com.ontotext.gate.vr.ClassNode
 
setClassesToHide(HashSet<String>) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
This method should be called to specify the ontology classes that should be disabled from the ocat.
setClassesToHideFileURL(URL) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Sets the filter file to be used.
setClassesToHideOn(boolean) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Use this method to switch on and off the filter.
setClassesToShow(HashSet<String>) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
This method should be called to specify the ontology classes that should be disabled from the ocat.
setClassesToShowFileURL(URL) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Sets the filter file to be used.
setClassesToShowOn(boolean) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
Use this method to switch on and off the filter.
setColor(String, Color) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
 
setColorScheme(IFolder, HashMap<String, Color>) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
For every ontology it generates the colors only once at the begining which should remain same throughout the programe
setMousePoint(Point) - Method in class gate.creole.ontology.ocat.AnnotationEditor
Sets the mouse point
setOntoTreeClassSelection(IFolder, HashMap<String, Boolean>) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
This is to initialise the classSelection as false to all the classes
setSchema(AnnotationSchema) - Method in class gate.creole.ontology.ocat.FeaturesEditor
 
setSelected(String, boolean) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
This method select/deselect the classes in the classSelectionMap
setSource(Object) - Method in class com.ontotext.gate.vr.ClassNode
Sets the source object
setTarget(Object) - Method in class com.ontotext.gate.vr.Gaze
Called by the GUI when this viewer/editor has to initialise itself for a specific object.
setTargetFeatures(FeatureMap) - Method in class gate.creole.ontology.ocat.FeaturesEditor
 
setTextLocation(int) - Method in class gate.creole.ontology.ocat.AnnotationEditor
 
setValueAt(Object, int, int) - Method in class gate.creole.ontology.ocat.FeaturesEditor.FeaturesTableModel
 
shouldShow(String) - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
showAnonymousClasses() - Method in class gate.creole.ontology.ocat.OntologyViewerOptions
 
showEmptyOntologyTree() - Method in class gate.creole.ontology.ocat.OntologyTreePanel
A method to show an empty ontology tree
showingAnnotationWindow - Variable in class gate.creole.ontology.ocat.OntologyTreePanel
Indicates whether the annotation window is being shown or not
showOntologyInOntologyTreeGUI(Ontology, HashMap<String, ArrayList<Annotation>>) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
This method is used to plot the ontology on the tree and generate/load the respective data in the memory
SIZE_X - Static variable in class com.ontotext.gate.vr.Gaze
size x when running from the tools menu
SIZE_Y - Static variable in class com.ontotext.gate.vr.Gaze
size y when running from the tools menu
soelAction - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
soelBtn - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
soerAction - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
soerBtn - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 
synchronizeTreeExpansion(JTree, JTree) - Static method in class com.ontotext.gate.vr.Gaze
Synchronizes the expansion of the given trees.

T

thisLayout - Variable in class com.ontotext.gate.vr.Gaze
 
toString() - Method in class com.ontotext.gate.vr.ClassNode
 
toString() - Method in interface com.ontotext.gate.vr.IFolder
 
typeCombo - Variable in class gate.creole.ontology.ocat.AnnotationEditor
 

U

unregisterHooks() - Method in class gate.creole.ontology.ocat.OntologyViewer
 
updatePVnInst2ClassesMap(OInstance, Set<RDFProperty>, Set<OClass>, HashMap<String, Set<OClass>>) - Method in class gate.creole.ontology.ocat.OntologyTreePanel
This method iterates through each instance of the ontology and obtains its all set properties.
Utils - Class in gate.creole.ontology.ocat
 
Utils() - Constructor for class gate.creole.ontology.ocat.Utils
 

V

valueForPathChanged(TreePath, Object) - Method in class com.ontotext.gate.vr.OntoTreeModel
 
viewMenu - Variable in class com.ontotext.gate.vr.Gaze
 
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